Everyday Low FODMAP Peanut Butter Cookies
There’s nothing like a freshly-baked peanut butter cookie! These healthier peanut butter cookies are made without flour, and less sugar, so they’re perfect for everyday snacking! Naturally low FODMAP, vegan, gluten free and PACKED with peanut butter-y flavor. Plus, this recipe is super simple — it’s made in just one bowl with just 8 ingredients.
I’ve said this before, but I’m not a huge sweets person. It’s not because I’m a dietitian either, because dietitians are kinda famous for their love of chocolate. I mean, I like the idea of cookies and cakes, but most are way too sweet for my tastes. So finding sweets I love often means making my own—which is probably why I have so many low FODMAP cookie recipes on the blog, like my epic tahini chocolate chip cookies.
(It’s also why all my gut health cookbook, Good For Your Gut, has a pretty substantial dessert chapter ha)
So these low FODMAP peanut butter cookies were really a labour of love. You might not realize this, but I actually have IBS-D myself…and when my gut goes wonky, I still lean on low FODMAP recipes until things calm down. I should admit that it took me a couple attempts to get them right: the first batches were too sweet. I set out to make a ‘full sugar’ cookie (since cane sugar is low FODMAP) but it was honestly just too sweet for me and I didn’t feel right sharing a recipe I wouldn’t want to eat much of myself.
I’ve got to say this straight out: if you want a full sugar, white flour cookie: do that. Eat it, enjoy every minute of it, and don’t look back. Your cookies don’t have to be ‘healthy’. But let’s say you have special dietary needs like an allergy or low FODMAP requirements. Or maybe you like to eat a LOT of cookies—so you want to enjoy those make with some nutrient-dense ingredients to help you stay energized. Well, then these are the cookies for you. And me. Let’s be cookie friends.
Let’s make these epic vegan low FODMAP peanut butter cookies
Soft and decadently delicious, prepare to fall in love with these healthy peanut butter cookies! In case you like to shorten the window between craving and eating as much as possible, these cookies take less than 30 minutes to make, require just one bowl and 8 ingredients to prepare. I mean, what more can you ask for?

Want to save this recipe?
Enter your email & I’ll send it to your inbox. Plus, get great new recipes from me every week!
Learn from my mistakes: Make sure your peanut butter is well stirred, so you get the right blend of fat and protein for the cookies. If the fat isn’t blended in well, the cookies could be a bit dry! If you’re down to the bottom of your PB jar and it’s looking firm as opposed to fluid, try adding a tablespoon of avocado oil in there for some extra moisture.


Nutrition Corner: Each peanut butter cookie has about 4g protein and 1.5g fiber. They are a more blood sugar friendly cookie, especially with the healthy fats and protein from the peanut butter and almond flour. And they’re low sugar, but not sugar free! It’s about 7g sugar per cookie.
DOWNLOAD YOUR FREE LOW FODMAP STARTER KIT HERE!
More yummy low FODMAP cookies + bars
- Healthy Vegan Breakfast Cookies with Oats + Almond Flour
- 4 Ingredient Vegan Shortbread Cookies
- One Bowl Low FODMAP Granola Bar
- Soft-baked Vegan Snickerdoodles
- Easy Almond Flour Thin Mints

Healthier Low FODMAP Peanut Butter Cookies
Ingredients
- 1 tablespoon ground flax
- 1 cup creamy natural peanut butter
- ¼ cup pure cane sugar
- ¼ cup brown cane sugar
- 1 teaspoon pure vanilla extract
- ¼ cup almond flour
- ½ teaspoon baking powder
- ½ teaspoon salt
Instructions
- Preheat oven to 375°F (190°C). Prepare a large baking sheet with parchment paper and set aside.
- In a medium bowl, stir the ground flax with 2 tablespoons of warm water and let sit for 5 minutes to thicken.
- Add peanut butter, cane sugar and brown sugar and vanilla and mix with a fork until blended. Then, sprinkle over almond meal, baking powder and salt and work in thoroughly with a fork until mixture is thick and well-combined.
- Scoop 1 tablespoon of dough and roll into a ball. Then flatten to ¼ inch (0.75cm) thick and 2 inches (5 cm) wide. Place 1 inch (2.5cm) apart on cookie sheet.
- Bake for 8-10 minutes until cookies look cracked on top (it will settle as they cool!) and bottoms appear golden brown. Remove from heat and let cool for at least 10 minutes – or completely – before handling as they will firm as they cool up.
- Store at room temperature, lightly covered, for 3-4 days. Cookies will freeze well.


20 Comments on “Everyday Low FODMAP Peanut Butter Cookies”
I’ve made these countless times! Love them
yay! thank you so much for taking the time to leave a rating and review, it really helps others discover the recipe 🙂
Easy, fast and absolutely delicious! 🧡
Yay!! Thanks for taking the time to rate the recipe Monika, it really helps.
I make these time after time. They got me through a time when I could only eat low fodmap stuff while recovering from sibo and candita. I replace flax seeds with 1/4 cup water + 1 tbsp chia seeds. I also use buckwheat flour instead of almond meal. I bake them for 8 mins and let them cool down. They are amazing. My family is always obsessed. Never change this recipe please!!!
This makes me so happy!! Everyone deserves a cookie…even when we’re on a therapeutic diet. Thank you for taking the time to review the recipe, it really helps others discover it.
Before making…can I used coconut sugar instead of brown and cane sugar??
Yes, it should be fine! Let us know how it goes 🙂
Preemptively doubled the recipe, and I’m glad that I did! They won’t last long. So yummy. Will be baking again and again.
I am so glad you love these Laura!! Thank you for taking the time to leave a rating and review, it really helps 🙂
Hi, can I sub one egg instead of the flax? Thanks
Totally!
Made these today, they came out soft an melt in your mouth fluffy…. Love them
I am so glad you enjoyed them!!!
I just made these today. They were easy to make and are yummy!!
Yay! I’m so glad you enjoyed them. Thanks for taking the time to comment
D
I just made these today and they are sooo good! I’ll be making them again very soon I’m sure.
I’m so glad you like them Christine! Thanks for letting me know…they’re already a fave around here 🙂
Comes out raw, like unbaked. Needs a flour or something to takeaway the moisture
Hi Eaman,
They do come out very soft when baked…and then firm as they cool. Any changes to the recipe? Let me know and let’s figure out a solution!